{ "_id": "6a1f2f43b401979e73427039", "Package": "NMADTA", "Type": "Package", "Title": "Network Meta-Analysis of Multiple Diagnostic Tests", "Version": "0.1.3", "Authors@R": "c(person(given = \"Xing\", family = \"Xing\",\nrole = c(\"aut\", \"cre\"), email = \"xxing8@jh.edu\",\ncomment = c(ORCID = \"0000-0001-9394-8957\")),\nperson(given = \"Boyang\", family = \"Lu\", role = c(\"aut\")),\nperson(given = \"Lifeng\", family = \"Lin\", role = c(\"aut\")),\nperson(given = \"Qinshu\", family = \"Lian\", role = c(\"aut\")),\nperson(given = \"James S.\", family = \"Hodges\", role = c(\"aut\")),\nperson(given = \"Yong\", family = \"Chen\", role = c(\"aut\")),\nperson(given = \"Haitao\", family = \"Chu\",\nrole = c(\"aut\"), email = \"chux0051@umn.edu\",\ncomment = c(ORCID = \"0000-0003-0932-598X\")))", "Maintainer": "Xing Xing ", "SystemRequirements": "JAGS 4.x.y (http://mcmc-jags.sourceforge.net)", "Description": "Provides statistical methods for network meta-analysis of\ndiagnostic tests to simultaneously compare multiple tests\nwithin a missing data framework, including: - Bayesian\nhierarchical model for network meta-analysis of multiple\ndiagnostic tests (Ma, Lian, Chu, Ibrahim, and Chen (2018)\n) - Bayesian Hierarchical\nSummary Receiver Operating Characteristic Model for Network\nMeta-Analysis of Diagnostic Tests (Lian, Hodges, and Chu (2019)\n).", "License": "GPL (>= 2)", "RdMacros": "Rdpack", "Encoding": "UTF-8", "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "LazyData": "true", "Packaged": { "Date": "2026-05-15 09:11:46 UTC", "User": "root" }, "Author": "Xing Xing [aut, cre] (ORCID:\n), Boyang Lu [aut],\nLifeng Lin [aut], Qinshu Lian [aut], James S. Hodges [aut],\nYong Chen [aut], Haitao Chu [aut] (ORCID:\n)", "Config/pak/sysreqs": "jags libicu-dev", "Repository": "https://xxing8jh.r-universe.dev", "Date/Publication": "2026-04-15 21:10:25 UTC", "RemoteUrl": "https://github.com/cran/NMADTA", "RemoteRef": "HEAD", "RemoteSha": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "MD5sum": "eb6d81c32aa9a55f5a29d3bb1897709e", "_user": "xxing8jh", "_type": "src", "_file": "NMADTA_0.1.3.tar.gz", "_fileid": "dadb5bde5e60e55f54840e5e5b60b72260c3f9e1907b466236daf9c7412f6765", "_filesize": 225753, "_sha256": "dadb5bde5e60e55f54840e5e5b60b72260c3f9e1907b466236daf9c7412f6765", "_created": "2026-05-15T09:11:46.000Z", "_published": "2026-06-02T19:30:11.236Z", "_distro": "noble", "_jobs": [ { "job": 79154888976, "time": 301, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7013857902" }, { "job": 79154888718, "time": 295, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7013856225" }, { "job": 79154888856, "time": 268, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7013839378" }, { "job": 79154889236, "time": 336, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7013857823" }, { "job": 79154888335, "time": 187, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7013772000" }, { "job": 79154888068, "time": 108, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7367793160" }, { "job": 79154889530, "time": 298, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7013857067" }, { "job": 79154889246, "time": 322, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7013865546" }, { "job": 79154889235, "time": 281, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7013852286" } ], "_buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/NMADTA", "_commit": { "id": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "author": "Xing Xing ", "committer": "cran-robot ", "message": "version 0.1.3\n", "time": 1776287425 }, "_maintainer": { "name": "Xing Xing", "email": "xxing8@jh.edu", "login": "xxing8jh", "uuid": 180215998, "orcid": "0000-0001-9394-8957" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0.0", "role": "Depends" }, { "package": "rjags", "version": ">= 4-6", "role": "Imports" }, { "package": "coda", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "ks", "role": "Imports" }, { "package": "reshape2", "role": "Imports" }, { "package": "MCMCpack", "role": "Imports" }, { "package": "MASS", "role": "Imports" }, { "package": "plotrix", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "grDevices", "role": "Imports" }, { "package": "Rdpack", "role": "Imports" }, { "package": "testthat", "role": "Suggests" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-42", "n": 1 }, { "week": "2025-44", "n": 1 }, { "week": "2026-03", "n": 1 }, { "week": "2026-16", "n": 1 } ], "_tags": [ { "name": "0.1.0", "date": "2025-10-14" }, { "name": "0.1.1", "date": "2025-10-29" }, { "name": "0.1.2", "date": "2026-01-14" }, { "name": "0.1.3", "date": "2026-04-15" } ], "_stars": 2, "_contributors": [ { "user": "xxing8jh", "count": 4, "uuid": 180215998 } ], "_userbio": { "uuid": 180215998, "type": "user", "name": "xxing8jh" }, "_downloads": { "count": 513, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/NMADTA" }, "_searchresults": 0, "_topics": [ "jags", "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NMADTA.html", "manual.pdf" ], "_realowner": "xxing8jh", "_cranurl": false, "_releases": [ { "version": "0.1.0", "date": "2025-10-14" }, { "version": "0.1.1", "date": "2025-10-29" }, { "version": "0.1.2", "date": "2026-01-14" }, { "version": "0.1.3", "date": "2026-04-15" } ], "_exports": [ "nmadt.hierarchical", "nmadt.hierarchical.MNAR", "nmadt.hsroc", "nmadt.hsroc.MNAR" ], "_datasets": [ { "name": "dat.kang", "title": "Study-level results on the multiple diagnostic tests for colorectal cancer detection", "object": "dat.kang", "class": [ "data.frame" ], "fields": [ "sid", "delta0", "delta1", "delta2", "T0", "T1", "T2", "n" ], "rows": 48, "table": true, "tojson": true } ], "_help": [ { "page": "dat.kang", "title": "Study-level results on the multiple diagnostic tests for colorectal cancer detection", "topics": [ "dat.kang" ] }, { "page": "nmadt.hierarchical", "title": "Hierarchical Model for Network Meta-Analysis of Diagnostic Accuracy Studies", "topics": [ "nmadt.hierarchical" ] }, { "page": "nmadt.hierarchical.MNAR", "title": "Hierarchical Model Network Meta-Analysis of Diagnostic Accuracy Studies Under MNAR Assumptions", "topics": [ "nmadt.hierarchical.MNAR" ] }, { "page": "nmadt.hsroc", "title": "HSROC Model for Network Meta-Analysis of Diagnostic Accuracy Studies", "topics": [ "nmadt.hsroc" ] }, { "page": "nmadt.hsroc.MNAR", "title": "HSROC Model for Network Meta-Analysis of Diagnostic Accuracy Studies Under MNAR Assumptions", "topics": [ "nmadt.hsroc.MNAR" ] }, { "page": "plot.nmadt", "title": "Plot method for `nmadt` objects", "topics": [ "plot.nmadt" ] }, { "page": "print.nmadt", "title": "Print method for `nmadt` objects", "topics": [ "print.nmadt" ] }, { "page": "summary.nmadt", "title": "Summary method for `nmadt` objects", "topics": [ "summary.nmadt" ] } ], "_rundeps": [ "cli", "coda", "cpp11", "farver", "FNN", "ggplot2", "glue", "gtable", "isoband", "kernlab", "KernSmooth", "ks", "labeling", "lattice", "lifecycle", "magrittr", "MASS", "Matrix", "MatrixModels", "mclust", "mcmc", "MCMCpack", "mgcv", "multicool", "mvtnorm", "nlme", "plotrix", "plyr", "pracma", "quantreg", "R6", "rbibutils", "RColorBrewer", "Rcpp", "Rdpack", "reshape2", "rjags", "rlang", "S7", "scales", "SparseM", "stringi", "stringr", "survival", "vctrs", "viridisLite", "withr" ], "_sysdeps": [ { "shlib": "libjags", "package": "jags", "headers": "jags", "source": "jags", "version": "4.3.2-2.2404.0", "name": "jags", "homepage": "https://mcmc-jags.sourceforge.io", "description": "Just Another Gibbs Sampler for Bayesian MCMC - binary\nJAGS is Just Another Gibbs Sampler. It is a program for analysis of\nBayesian hierarchical models using Markov Chain Monte Carlo (MCMC)\nsimulation not wholly unlike BUGS.\n\nJAGS was written with three aims in mind:\n* To have an engine for the BUGS language that runs on Unix\n* To be extensible, allowing users to write their own functions,\ndistributions and samplers.\n* To be a plaftorm for experimentation with ideas in Bayesian modelling\n\nThis package contains the 'jags' binary as well as the associated\nshared library modules loaded by the binary." }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 1.9030899869919438, "_indexed": true, "_nocasepkg": "nmadta", "_universes": [ "xxing8jh" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.3", "date": "2026-05-15T09:14:05.000Z", "distro": "noble", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "b9b221ac70a1144627920b355ff87e6e21f27603eb26861218088e86f2c8ed3b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.6.0", "os": "linux", "version": "0.1.3", "date": "2026-05-15T09:14:03.000Z", "distro": "noble", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "a521518af8cb3799e435738db575edc02aefa4d50758cd5530e538a0867eea29", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.5.3", "os": "mac", "version": "0.1.3", "date": "2026-05-15T09:14:04.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "c6750073dde68a92a986c2fa9681a2ec0f164e1950dce07c3b16a9abcc843e4f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.6.0", "os": "mac", "version": "0.1.3", "date": "2026-05-15T09:14:35.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "91738f53fe70c0976c21e94445730d96476023bd0f4fa5d75f9e9fa00def9a0d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.7.0", "os": "win", "version": "0.1.3", "date": "2026-05-15T09:13:15.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "ef5bc50010051bbd56a7be298c250ea081c7f6dd7a84d15127a2087984c95aac", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.5.3", "os": "win", "version": "0.1.3", "date": "2026-05-15T09:13:48.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "ba6b1244f3f76623365323c9f6cdb5f31f2f0232bb4abd12486fc4043e9239ca", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.6.0", "os": "win", "version": "0.1.3", "date": "2026-05-15T09:13:03.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "db1d49345c7e7d94a9dbc9cd75b2fd2fc112af76efc8697ff6b402a1ef3fe1b8", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.3", "date": "2026-06-02T19:29:48.000Z", "commit": "3a26d065d548e0bf246dd3fef78d12c30c07bd28", "fileid": "92d3bd90ca2ff4127b26e3128210e8c5d6ac4c84824b41867f129c454095bdc9", "status": "success", "buildurl": "https://github.com/r-universe/xxing8jh/actions/runs/25909790996" } ] }